OMIA group 162
Cardiomyopathy, dilated
The chain reaches the human disease arrhythmogenic right ventricular dysplasia 1, which Mondo defines as: “Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the TGFB3 gene.” It reaches 6 more human diseases, listed below.
The chain
From the animal disease to the drugs. The page shows what each step found and where the chain stopped. It does not say whether the animal is a model of a human disease.
-
Animal disease
Reached
OMIA records it in 11 species entries marked as a defect.
-
Human disease
Reached
7 Mondo diseases.
-
Human gene
Reached
2 human genes.
-
Target evidence
Reached
6 Open Targets associations, with a best score of 0.07.
-
Drugs
Reached
1 ChEMBL drug, 1 approved. None has been tested for this disease.
Natural-model score
How complete and how well supported the chain to each human disease is, out of 100, by stated rules. It does not say that the animal is a validated model of the human disease. How the score works.
53.6 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | Open Targets score of 0.03 | 1.1 of 35 |
| Drugs | A drug has reached phase 2/3 for this disease | 17.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
40.1 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | Open Targets score of 0.07 | 2.6 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
40.0 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | Open Targets score of 0.07 | 2.5 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
39.1 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | Open Targets score of 0.05 | 1.6 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
39.0 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | Open Targets score of 0.04 | 1.5 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
37.5 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | No Open Targets association with this disease | 0.0 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
37.5 out of 100
| Part | Computed from | Points |
|---|---|---|
| Target evidence | No Open Targets association with this disease | 0.0 of 35 |
| Drugs | Drugs act on its genes, but no drug has been tested for this disease | 2.5 of 25 |
| Ortholog | One to one ortholog | 20.0 of 20 |
| Both routes | One route found this disease | 5.0 of 10 |
| Species | 11 naturally occurring species entries marked as a defect | 10.0 of 10 |
Species
The chain follows only the species entries that OMIA marks as a defect.
| Species | Scientific name | OMIA entry | A defect |
|---|---|---|---|
| black-pencilled marmoset | Callithrix penicillata | OMIA:000162-57378 | Yes |
| dog | Canis lupus familiaris | OMIA:000162-9615 | Yes |
| domestic cat | Felis catus | OMIA:000162-9685 | Yes |
| domestic cattle | Bos taurus | OMIA:000162-9913 | Yes |
| golden hamster | Mesocricetus auratus | OMIA:000162-10036 | Yes |
| meerkat | Suricata suricatta | OMIA:000162-37032 | Yes |
| pig | Sus scrofa | OMIA:000162-9823 | Yes |
| rabbit | Oryctolagus cuniculus | OMIA:000162-9986 | Yes |
| sea otter | Enhydra lutris | OMIA:000162-34882 | Yes |
| tufted capuchin | Sapajus apella | OMIA:000162-9515 | Yes |
| turkey | Meleagris gallopavo | OMIA:000162-9103 | Yes |
Genes
Each gene OMIA records for a species entry, and the human gene it reaches through Ensembl's orthologs.
| Species | Animal gene | Human gene | Ortholog |
|---|---|---|---|
| black-pencilled marmoset | No gene | OMIA records no gene for this species entry. | |
| dog | No gene | OMIA records no gene for this species entry. | |
| domestic cat | No gene | OMIA records no gene for this species entry. | |
| domestic cattle | OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) NCBI Gene 523579 | OPA3 Ensembl | one to one |
| golden hamster | SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) NCBI Gene 101837953 | Ensembl does not know this NCBI Gene identifier. | |
| meerkat | No gene | OMIA records no gene for this species entry. | |
| pig | No gene | OMIA records no gene for this species entry. | |
| rabbit | No gene | OMIA records no gene for this species entry. | |
| sea otter | No gene | OMIA records no gene for this species entry. | |
| tufted capuchin | No gene | OMIA records no gene for this species entry. | |
| turkey | TNNT2 troponin T type 2 (cardiac) NCBI Gene 100303665 | TNNT2 Ensembl | one to one |
Human diseases
Two routes lead from an OMIA group to a Mondo human disease: OMIA's own Mondo link, and the group's OMIM numbers through Mondo's cross-references.
- OMIA's own Mondo link: OMIA links the group to no Mondo disease.
- OMIA's OMIM numbers: found a disease.
| Mondo disease | Name | Found by |
|---|---|---|
| MONDO:0007152 | arrhythmogenic right ventricular dysplasia 1 Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the TGFB3 gene. | OMIA's OMIM numbers |
| MONDO:0010543 | Barth syndrome Barth syndrome (BTHS) is an inborn error of phospholipid metabolism characterized by dilated cardiomyopathy (DCM), skeletal myopathy, neutropenia, growth delay and organic aciduria. | OMIA's OMIM numbers |
| MONDO:0007269 | dilated cardiomyopathy 1A Familial dilated cardiomyopathy with conduction defect due to LMNA mutation is a rare familial dilated cardiomyopathy characterized by left ventricular enlargement and/or reduced systolic function preceded or accompanied by significant conduction system disease and/or arrhythmias including bradyarrhythmias, supraventricular or ventricular arrhythmias. Disease onset is usually in early to mid-adulthood. Sudden cardiac death may occur and may be the presenting symptom. In some cases, it is associated with skeletal myopathy and elevated serum creatine kinase. | OMIA's OMIM numbers |
| MONDO:0010951 | dilated cardiomyopathy 1B A dilated cardiomyopathy that has material basis in variation in the chromosome region 9q13. | OMIA's OMIM numbers |
| MONDO:0011095 | dilated cardiomyopathy 1D Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene. | OMIA's OMIM numbers |
| MONDO:0012746 | dilated cardiomyopathy 2A A dilated cardiomyopathy that has material basis in mutation in the TNNI3 gene on chromosome 19q13. | OMIA's OMIM numbers |
| MONDO:0010542 | dilated cardiomyopathy 3B Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene. | OMIA's OMIM numbers |
Target evidence
Each Open Targets association between one of the group's human genes and one of its human diseases, with its overall score and the score for each kind of evidence.
| Human gene | Human disease | Score | Evidence | Kinds of evidence |
|---|---|---|---|---|
| TNNT2 | dilated cardiomyopathy 1A | 0.07 | 4 | Animal model 0.60 |
| TNNT2 | arrhythmogenic right ventricular dysplasia 1 | 0.07 | 3 | Animal model 0.60 |
| TNNT2 | dilated cardiomyopathy 2A | 0.05 | 1 | Animal model 0.37 |
| TNNT2 | dilated cardiomyopathy 3B | 0.04 | 1 | Animal model 0.35 |
| TNNT2 | Barth syndrome | 0.03 | 3 | Animal model 0.26 Literature 0.02 |
| OPA3 | Barth syndrome | 0.00 | 4 | Literature 0.04 |
Drugs
Drugs act on TNNT2, but none has been tested for this disease.
| Drug | Acts on | How | Latest stage | Tested for this disease |
|---|---|---|---|---|
| Levosimendan | TNNT2 | positive modulator | Approved | No |
The drug data is ChEMBL's, under CC BY-SA 3.0, and came through Open Targets release 26.09.